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SRX25508004: Latimeria chalumnae PacBio HiFi sequencing
1 PACBIO_SMRT (Revio) run: 2.8M spots, 39.8G bases, 13.7Gb downloads

Design: PippinHT size selection
Submitted by: G10K
Study: Latimeria chalumnae (African coelacanth) genome, fLatCha1, sequence data
show Abstracthide Abstract
The African coelacanth (Latimeria chalumnae) is a lobe-finned fish or crossopterygian, one of two extant species of coelacanth, a rare order of vertebrates more closely related to lungfish and tetrapods than to the common ray-finned fishes. The African coelacanth was believed to have been extinct over 65 million years ago, but was rediscovered off the coast of South Africa in 1938. (from Wikipedia and NOAA fisheries entries). This sample of an individual found on the Comoros Islands was procured by Ahamada Said and Chris Amemiya, and used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Olivier Fedrigo, Giulio Formenti, and Jennifer Balacco.
Sample: Animal sample from Latimeria chalumnae (African coelacanth) for VGP reference genome, fLatCha1
SAMN39710040 • SRS22162627 • All experiments • All runs
Library:
Name: fLatCha1_PacBio_HiFi_fastq_2
Instrument: Revio
Strategy: WGS
Source: GENOMIC
Selection: size fractionation
Layout: SINGLE
Runs: 1 run, 2.8M spots, 39.8G bases, 13.7Gb
Run# of Spots# of BasesSizePublished
SRR300323452,808,59139.8G13.7Gb2024-07-30

ID:
34471638

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